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Version log

  • Ver 0.1.0 - 4 January 2024

    • Visualisation of genomic signal tracks from sequencing expeirments is now supported!
    • Multiple features and styles for single locus visualisation are introduced (GC content, GC skew, novel styles for label)
    • Multiple parameters are introduced, including -w, --windows that allows to specify coordinates for visualisation more easily.

  • Ver 0.0.14 - 29 December 2024

    • An issue with visualisation of feature lables for single locus without mmseqs clustering is was fixed.

  • Ver 0.0.13 - 19 December 2024

    • Bug with parsing folder containing genbank files is fixed.

  • Ver 0.0.12 - 4 December 2024

    • Minor bug related to non-coding features without specified orientation is fixed.

  • Ver 0.0.11 - 24 October 2024

    • Functional annotation of proteins with pyhmmer hmmscan is now supported!
    • A set of parameters to control hmmscan annotation is addded.
    • Now single file path input instead of folder name with '-gff' and '-gb' parameters is supported.

  • Ver 0.0.10.1 - 22 October 2024

    • -snl, --show-noncoding-labels and -sfnl, --show-first-noncoding-label paraemetrs are added for controlling non-coding feature labels.

  • Ver 0.0.10 - 22 October 2024

    • Visualisation and parsing of non-coding features (tRNAs, tmRNAs, pseudogene..) is added!
    • New parameter -alip, --add-locus-id-prefix is added in order to process the duplication feature problem.

  • Ver 0.0.9.3 - 1 October 2024

    • Linux path adjustment bug is fixed.
    • Genbank files parsing adjusted for incomplete features.

  • Ver 0.0.9 - 27 September 2024

    • Set of new configuration files and styles for layouts of A4 page (one-,two-columns, and landscape)
    • New design and locus label positions.
    • New config and cmd parameters.
    • Update of the home page with new uiser guide and the gallery page.

  • Ver 0.0.8 - 18 September 2024

    • Suffix requirments for input files are removed.
    • Subset of files with incorrect format will not lead to the error, only to the warning message.

  • Ver 0.0.7 - 4 September 2024

    • Minor API update.
    • --one-cluster parameter is added.

  • Ver 0.0.6 - 2 July 2024

    • Update of parameter names.

  • Ver 0.0.5 - 27 June 2024

    • Minor fixes.

  • Ver 0.0.4 - 13 June 2024

    • Minor fixes.

  • Ver 0.0.3 - 3 May 2024 - first public release.